Instructor
- Instructor: Tue Vu
- Office: 2119 Barre Hall, Clemson University
- Office Hours: Wed 8.30-11.30 Zoom
- Email: tuev@clemson.edu
Repository description
Some notes on Research Computing for HPC.
Instructor
- Instructor: Tue Vu
- Office: 2119 Barre Hall, Clemson University
- Office Hours: Wed 8.30-11.30 Zoom
- Email: tuev@clemson.edu
Repository description
Some notes on Research Computing for HPC.
Topic |
Description |
Setup | Preparing for the course |
1. Downloading data with with NEAR using API | How to download data from website using API? |
2. Fine-tuning GPT3 using OpenAI API | How to train GPT3 using OpenAI API Platform |
3. Using ArcPy to partition grid into smaller boxes | Using ArcPy to divide the shapefile into smaller boxes |
4. Docker container R | How to run R container in Palmetto HPC |
5. Docker container ROS | How to run ROS container in Palmetto HPC |
6. How to install Abaqus to Palmetto | Install Abaqus to Palmetto |
7. Install Amber with GPU support | How to install Amber with GPU support to Palmetto |
8. How to install Ansys to Palmetto | Install Ansys to Palmetto |
9. Install ArcPy to Palmetto JHub | How to install Arcpy to Palmetto |
10. Install NCEPLIBS-external from github | How to Install NCEPLIBS-external from github |
11. Install Pytorch with GPU support | How to install Pytorch with GPU support to Palmetto |
12. Install RAPIDS with GPU support | How to install Rapids with GPU support to Palmetto |
13. How to install Tensorflow with GPU support | Install Tensorflow with GPU support to Palmetto |
14. How to install WIEN2k | Install WIEN2k to Palmetto |
15. Install R kernel to JupyterHub in Palmetto | How to Install R kernel to JupyterHub in Palmetto |
16. How to install Tinker-OpenMM | Install Tinker-OpenMM to Palmetto |
17. Parallel with job array | How to run parallel with job array in Palmetto |
18. Parallel with Julia | How to run parallel with Julia in Palmetto |
19. Parallel Computing in Matlab | How to utilize multiple cores for Matlab programming |
20. Parallel Computing in Python | How to utilize multiple cores for Pythopn programming |
21. Parallel Computing in R | How to utilize multiple cores for R programming |
22. How to run parallel with gnu-parallel | Parallel with gnu-parallel in Palmetto |
23. Parallel with openmpi | How to run parallel with openmpi in Palmetto |
24. Publish this Github page | How to Publish this Github page? |
25. Install python packages | How to install certain tough package in python |
26. How to install Quantum Espresso | How to install Quantum Espresso in Palmetto |
Finish |
The actual schedule may vary slightly depending on the topics and exercises chosen by the instructor.